Conference Presentations and Posters
Nagle MF, Yuan J, Kaur D, Li F, Ma C, Peremyslova E, Jiang Y, Jawdy S, Chem J, Feng K, Yates T, Tuskan G, Muchero W, Li F, Strauss SH. GWAS with high-throughput machine vision phenomics uncovers genetic regulators of in vitro transformation and regeneration in Populus trichocarpa. Plant and Animal Genome Conference, Forest Trees Session. San Diego, California. January 5, 2023. Oral presentation.
Nagle MF, Yuan J, Kaur D, Ma C, Peremyslova E, Jiang Y, Jawdy S, Chem J, Feng K, Yates T, Tuskan G, Muchero W, Li F, Strauss SH. Towards improving precision and power in plant GWAS: High-throughput computer vision phenomics and combined variant testing. Oregon Data Science Consortium (ODSC) Symposium. December 2, 2022. Oral presentation.
Nagle MF, Yuan J, Kaur D, Ma C, Peremyslova E, Jiang Y, Willig CJ., Goralogia GS, Niño de Rivera A, McEldowney M, Yates TB, Feng K, Goddard A, Magnuson A, Muchero W, Li F, Strauss SH. GWAS implicates genetic diversity in stress signaling and cell division pathways as causes of extensive natural variation in shoot and root regeneration in black cottonwood (P. trichocarpa). American Society for Plant Biologists, 2022 Summit. Portland, Oregon. July 2022. Poster presentation.
Ryan NW, Goralogia GS, Ma C, Nagle MF, Strauss SH. Overexpression of the GRF-GIF transcription factor chimera modifies transformation and regeneration efficiency in Populus and Eucalyptus. Plant and Animal Genome Conference. Virtual Conference. January 2022. Poster presentation delivered by Ryan NW.
Nagle MF, Ma C, Peremyslova E, Strauss SH. Transformation Improvement in Poplar (Populus trichocarpa): Effects of antioxidant and auxin treatments. Society for In Vitro Biology. Virtual Conference. June 6, 2020. Poster presentation delivered by Dr. Strauss.
Strauss SH, Nagle MF, Yuan J, Kaur D, Li J, Doshi N, Ma C, Peremyslova E, Jiang Y, Li F. Recognition and quantitative analysis of transformation in tissue cultures using hyperspectral imaging and machine learning. Society for In Vitro Biology. Virtual Conference. June 6, 2020. Oral presentation delivered by Dr. Strauss.
Nagle MF, Yuan J, Kaur D, Li F, Ma C, Jiang Y, Strauss SH. Transformation phenomics: Detection of transgenic tissues in tissue cultures by cross-referencing of RGB and hyperspectral image datasets analyzed by deep learning and regression. Phenome. Tucson, Arizona. Feb 26, 2020. Oral presentation.
Strauss SH, Contreras R, Nagle MF. Time for CRISPR? A look at the options for creating novel ornamentals with gene editing and genetic engineering (GE) techniques. FarWest Nursery Science and Technology Show. Portland, OR. August 2019.
Yuan J, Zhou Z, Nagle MF, Ekaterina P, Behnoudfar A, Doshi NA, Mewalal R, Ma C, Magnuson AC, Jiang Y, Strauss SH, Li F. Web-based Annotation Tool for Image-based Phenotyping. Computer Vision Problems in Plant Phenotyping (CVPPP). Long Beach, CA. August 2019.
Nagle MF, Ma C, Peremyslova E, Magnuson A, Yuan J, Doshi N, Li F, Jiang Y, Duan C, Strauss SH. Advanced Phenotypic Analysis of in vitro Development and Transformation for GWAS in Populus: Machine Vision Analysis of RGB and Hyperspectral Images. Society for In Vitro Biology Conference. San Diego, CA. July 18, 2019. Poster presented by co-author Cathleen Ma.
Nagle MF, Yuan J, Zhou Z, Doshi N, Li F, Ma C, Magnuson A, Draves C, Jones H, Crothers N, Kemeny G, Braumann D, Jiang Y, Mewalal R, Strauss SH. Genome-wide association studies of in vitro regeneration inPopuluswith machine vision and hyperspectral phenomics. Plant and Animal Genome Conference. San Diego, CA. Jan 14, 2019. Poster presentation.
Nagle MF, Yuan J, Zhou Z, Doshi N, Li F, Ma C, Magnuson A, Draves C, Jones H, Crothers N, Kemeny G, Braumann D, Jiang Y, Mewalal R, Strauss SH. Next-generation phenomics in support of machine vision and GWAS to identify genes controlling regeneration and transformation inPopulus trichocarpa. Plant and Animal Genome Conference. San Diego, CA. Jan 13, 2019. Oral presentation.
Nagle MF, Elorriaga E, Ma C, An X, Klocko A, Strauss SH. High rate of mutagenesis in gene-edited poplars and eucalypts. Center for Advanced Forestry Systems. Portland, OR. May 3, 2017. Poster presentation.
Nagle MF, Klocko A, Elorriaga E, Ma C, Strauss SH. Rational design of CRISPR/Cas9 constructs for generation of sterile Eucalyptus. Center for Genome Research and Biocomputing 2016 Symposium, Oregon State University, Corvallis, OR. Sept 9, 2016. Poster presentation.